Insertion junction: CLIP2.003296_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003296
Chromosome:chromosome 2
Location:2330427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090650 SEC20 (1 of 1) K08497 - protein transport protein SEC20 (SEC20); Qb-SNARE protein, Sec20-family CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGAGTTTGCCGCCGAGGTGGCTCGCCTAGAGGCGGCGCGTGCTGCCG
Internal bar code:GTTATGCGCTTAACTATACACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2320
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTTAGCCAACGCCTCCTG
Suggested primer 2:CTTGCAGACGACCCTGAGTT