Insertion junction: CLIP2.003296_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003296
Chromosome:chromosome 2
Location:2330428
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090650 SEC20 (1 of 1) K08497 - protein transport protein SEC20 (SEC20); Qb-SNARE protein, Sec20-family CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTCCGCAAGGTGACTGCGCAGCCACCAGGGCAGGGCACTCACGCCCT
Internal bar code:GTTATGCGCTTAACTATACACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3567
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCAGACGACCCTGAGTT
Suggested primer 2:TCTTTAGCCAACGCCTCCTG