Insertion junction: CLIP2.003301_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003301
Chromosome:chromosome 17
Location:4100437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728950 RFD2 diaminohydroxyphosphoribosylaminopyrimidine deaminase; (1 of 1) PTHR11079//PTHR11079:SF76 - CYTOSINE DEAMINASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACACACGTAACCATGATACGGCACACCACGCAACGTCACGCAAGCAAT
Internal bar code:CGGGGTACGACAGAAATCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:857
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGATATAGGGGAGGCCGGAT
Suggested primer 2:CGGACAGCCCCATCTAATCC