Insertion junction: CLIP2.003309_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003309
Chromosome:chromosome 9
Location:2574821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392500 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATATCACATGGCATTTCATCTTAGCAGTTCCGGCGCAGCGAGCGGCATA
Internal bar code:CTGATTGGCGGGTCATTATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:445
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGATGGGGTTGGACTAAC
Suggested primer 2:AATGGGCGGAACTGATCGTT