Insertion junction: CLIP2.003310_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003310
Chromosome:chromosome 10
Location:1106534
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425350 (1 of 6) IPR001245//IPR011009 - Serine-threonine/tyrosine-protein kinase catalytic domain // Protein kinase-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGATGTGGAAACAGGCACTGCAGCCGGCGTGGCGGTCGAGGCGCAAG
Internal bar code:AGATCTTTATACGTTGAGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2592
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCAACAACACGCTTATCC
Suggested primer 2:GGAGCTCCTAATGACTCGGC