Insertion junction: CLIP2.003328_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003328
Chromosome:chromosome 3
Location:3504519
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167400 (1 of 1) PF11282 - Protein of unknown function (DUF3082) (DUF3082) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGACAACATGAGAGAGTACGACGAATATCCTGAACTGGCTGCAAACGT
Internal bar code:GCGTATCTAGCTATTGGGGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4717
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGGCGGGCAAAGCTATA
Suggested primer 2:TAGCAAGGGGTGATTGGCAG