Insertion junction: CLIP2.003330_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003330
Chromosome:chromosome 2
Location:3474702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099000 SYP71 Qc-SNARE protein, SYP7-family; (1 of 2) K08506 - syntaxin of plants SYP7 (SYP7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCACTTCAAGGGGAGCGGCCTCAGCCCTCAAGTACGGCACCTGACACG
Internal bar code:CATTTGAAGGACCCAATCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:384
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCAAGACCAGGGGCAAT
Suggested primer 2:GTCAAGCATACTGGCGCATG