Insertion junction: CLIP2.003330_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003330
Chromosome:chromosome 2
Location:3474727
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099000 SYP71 Qc-SNARE protein, SYP7-family; (1 of 2) K08506 - syntaxin of plants SYP7 (SYP7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACGCAGATCAAGGAGCTGATTGAAAAGGTCTACGCGGTGCCGGATGG
Internal bar code:TTAGAATTGAGGAAATTTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3015
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAAGCATACTGGCGCATG
Suggested primer 2:CCATCAAGACCAGGGGCAAT