Insertion junction: CLIP2.003332_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003332
Chromosome:chromosome 16
Location:2620977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661250 THB9 (1 of 6) PTHR10681//PTHR10681:SF118 - THIOREDOXIN PEROXIDASE // SUBFAMILY NOT NAMED; Truncated hemoglobin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATATAACCGTACACATACAAGTGTTGCGGAGCACATTCATCTGGGAAT
Internal bar code:AATCTCGGTGCATCAGCCGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3308
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCAGGTTGGCATAGTCC
Suggested primer 2:GGACATATGTCGTCGGGCAT