Insertion junction: CLIP2.003336_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003336
Chromosome:chromosome 2
Location:6486323
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388750 TEF21 (1 of 1) PTHR11200:SF170 - PHOSPHOINOSITIDE PHOSPHATASE SAC1; Phosphoinositide phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAACGCTTGCGCCCTTCGCCACCGCCCACTCCACGTGCAGGCCGGCGC
Internal bar code:TAGAGGGTTAAGGTGGTGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3800
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAACTCCTTCTCCACGGC
Suggested primer 2:TTCGACTTCCACCACGAGTG