Insertion junction: CLIP2.003338_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003338
Chromosome:chromosome 6
Location:533138
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g252350 CGL70 (1 of 1) PTHR33102:SF13 - DVL17; Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTATTTTCCCAACGTACTAGCCGACGAGGGCAGCGTACAGTACGTAGTA
Internal bar code:TATCAGCAGCTTAAGCATCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2292
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TTACTACGGGGCCAGCAAAG
Suggested primer 2:CTCAGTGTAGCCCCCAAAGG