Insertion junction: CLIP2.003340_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003340
Chromosome:chromosome 3
Location:5326501
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182900 (1 of 1) IPR008559 - Uncharacterised conserved protein UCP023322, transmembrane eukaryotic intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCAGGCAGTGGGCCGTCGGGAACGGCGCTGGGGCTGCATGGGATGCGT
Internal bar code:CCGATATCGGAAAAGGGTTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2655
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAAATGTCCAACAACGGC
Suggested primer 2:GGACAGCACGTACAGGAACA