Insertion junction: CLIP2.003346_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003346
Chromosome:chromosome 1
Location:4437295
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g030250 (1 of 1) 3.1.3.57 - Inositol-1,4-bisphosphate 1-phosphatase / Inositol polyphosphate 1-phosphatase 5'UTR
Cre01.g030300 (1 of 2) PF08627 - CRT-like, chloroquine-resistance transporter-like (CRT-like) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCGCGTACTCGGCTCTGAGGGCCCTCCAGAGCCGGATGCCGCATCAA
Internal bar code:TGCCCGTTATACGGCGCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:254
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGAGGAGGACGTGAGGT
Suggested primer 2:ACGGCCTGGACAGCAAATTA