Insertion junction: CLIP2.003346_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003346
Chromosome:chromosome 15
Location:5323876
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAAATGGCGCATTGACGACAACACGCCGACCTGCGCCCACTGAGCTCA
Internal bar code:GCGCATCTTGGAGACAAGCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5423
LEAP-Seq percent confirming:9.58904
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:66
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCAGCGCCTTCAGACTA
Suggested primer 2:TAGCGCGTCTGTGATTGGTT