Insertion junction: CLIP2.003350_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003350
Chromosome:chromosome 1
Location:4790152
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033250 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGTGTCGCTGGGCTGCCCTGGGGCCCACATGGTACGCCCTGACAACG
Internal bar code:CCTGTCTGAACGAAGGGTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1872
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACCTCCCCTGCCCAAAA
Suggested primer 2:TTCATGCGTGGGTTTTGCAG