Insertion junction: CLIP2.003350_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003350
Chromosome:chromosome 5
Location:2180116
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237350 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATAGGCAAGGGGTCCAAGCCAATTGCACGCACACGTGTCGTTTACAG
Internal bar code:TTTCACAACGGCAGCAGCTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2444
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AAACACCTGCCCCAACTCAA
Suggested primer 2:TGAATGAGCAATCTGCCCGT