Insertion junction: CLIP2.003352_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003352
Chromosome:chromosome 12
Location:1653837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486600 MEX1 (1 of 1) PTHR34809//PTHR34809:SF1 - FAMILY NOT NAMED // MALTOSE EXCESS PROTEIN 1, CHLOROPLASTIC-RELATED; Maltose exporter-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCACGTGTCTGGGCCTAAAACTTACAGCACAAGAGTGCGATACGGTT
Internal bar code:GGAAGTTGGGGTTCTCAAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2537
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AACGACCTGTACACGGTGAC
Suggested primer 2:TGATTCCGCGGTTGGATGAA