Insertion junction: CLIP2.003355_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003355
Chromosome:chromosome 17
Location:3027325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g719900 PWD1 Phosphoglucan water dikinase 1; (1 of 1) K15535 - phosphoglucan, water dikinase (PWD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTGCCGCTCCTGCAGCTCAGCTGAGTCTCATCAACCGCCCCATCCCG
Internal bar code:TGGGTGTCTGGGGTACTGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1147
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCCTTTCCTTAGCCGAAC
Suggested primer 2:GTGGCGCCATTGTTGAATGT