Insertion junction: CLIP2.003364_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003364
Chromosome:chromosome 2
Location:2553945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g092550 TPR1 (1 of 1) 6.2.1.4 - Succinate--CoA ligase (GDP-forming) / Succinyl-CoA synthetase (GDP-forming); Tetratricopeptide-repeat protein 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATGTGCAAGCGCACAGTGACCATTGAGTGCTGCCGAGGCCCAATTTG
Internal bar code:CGCTGCTGCTGATTGATTTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2841
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGCAGCTGGATGTGGTTG
Suggested primer 2:TGAAGAACATGAGCCCCGAC