Insertion junction: CLIP2.003377_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003377
Chromosome:chromosome 10
Location:6425624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464650 CGL36 (1 of 1) PF12646 - Domain of unknown function (DUF3783) (DUF3783); Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAAATATTGCGGGTTTGGCTGGCTTGGCGTGTGCCGGCAGGTGCTCG
Internal bar code:CGAAGATGAGGTGGCGTATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3246
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TTACGACACAAGGGACAGCC
Suggested primer 2:ACATGTAAACCCGTGCCCAT