Insertion junction: CLIP2.003380_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003380
Chromosome:chromosome 9
Location:1523257
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399400 TGL15,FAP199 Lipase-Domain Containing Flagellar Associated Protein 199; (1 of 22) PF01764 - Lipase (class 3) (Lipase_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGCGCATGCGACATGCATGTCAACTGAAACCGCGCGCCACCGCACCG
Internal bar code:CTTATACGAGTTAACATAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3519
LEAP-Seq percent confirming:72.1311
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGCAAGAGCTATGGAGAT
Suggested primer 2:TCCATAGCTAGCTCTTGCGC