Insertion junction: CLIP2.003386_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003386
Chromosome:chromosome 7
Location:4108138
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g342800 CGL16 (1 of 1) PF07063 - Domain of unknown function (DUF1338) (DUF1338); Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTGCGGAATGCGAAGTGGTCGTGCCCCAGCGCCTCCACACCCGGCCA
Internal bar code:ATAAGGCCCCTTGGGGAGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:308
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAAATGGCACTGTTCCGCAA
Suggested primer 2:CTCATAACCCCCACAACCCC