Insertion junction: CLIP2.003386_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003386
Chromosome:chromosome 7
Location:4108144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g342800 CGL16 (1 of 1) PF07063 - Domain of unknown function (DUF1338) (DUF1338); Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAGCACGAGCGGGCGAGTGGGCATGTGGGTAGCGGGCATCTGGGCGGC
Internal bar code:ATAAGGCCCCTTGGGGAGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1371
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATAACCCCCACAACCCC
Suggested primer 2:CAAATGGCACTGTTCCGCAA