Insertion junction: CLIP2.003388_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003388
Chromosome:chromosome 13
Location:1408061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571950 (1 of 1) 2.1.1.104 - Caffeoyl-CoA O-methyltransferase / Trans-caffeoyl-CoA 3-O-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAGTCCTTCGTGCCCTGCACTCTCCTGCCCTTCCCTGTACCTCTGCG
Internal bar code:GTGGCAAGGGGCCCCAGGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4802
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:103
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:GACACTGGTGACCCTGTCTG
Suggested primer 2:GCCATGTCATAGGATCCGGG