Insertion junction: CLIP2.003388_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003388
Chromosome:chromosome 13
Location:1408063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571950 (1 of 1) 2.1.1.104 - Caffeoyl-CoA O-methyltransferase / Trans-caffeoyl-CoA 3-O-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCATAGGTAACTAAGAAAAGGGCAATGTGGTTGGGGGAAATGGATGTT
Internal bar code:TCATTATAATCAAGGTTTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3978
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATGTCATAGGATCCGGG
Suggested primer 2:GACACTGGTGACCCTGTCTG