Insertion junction: CLIP2.003397_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003397
Chromosome:chromosome 7
Location:246439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313800 CGL138 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGCCAAGGTCGGAGGCGCAGCAAAGGTGCGCAGTTGCGCCCGGTGC
Internal bar code:TTGACCCCATATGCGGGAGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3698
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGCTACTGCTACTGGTG
Suggested primer 2:CCCTGTCTGCTTAAGCTGCT