Insertion junction: CLIP2.003403_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003403
Chromosome:chromosome 16
Location:1924111
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAACCAGACACCGGCAGCTCTCGACCTGCGCGCCGGCGCCGCTTCTC
Internal bar code:TCGAAGGGGGCTCTCGTCCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:4056
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCACGAAGAGGTGGTCTG
Suggested primer 2:AAGTTGGACTGACAGCCTCG