Insertion junction: CLIP2.003404_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003404
Chromosome:chromosome 15
Location:516504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g636050 CPLD31 Conserved in the Plant Lineage and Diatoms; (1 of 2) PTHR35514//PTHR35514:SF1 - FAMILY NOT NAMED // THYLAKOID LUMENAL 15.0 KDA PROTEIN 2, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAGAGGGGTTGGGACGAGGGACCAGCTTGCGAACCAGCACGTGGCGG
Internal bar code:TACATATAATTAAAGGCAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:870
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCATTGGCGGATTGATGCAG
Suggested primer 2:TCGCTCGACATGTCAACACA