Insertion junction: CLIP2.003409_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003409
Chromosome:chromosome 5
Location:1578523
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234750 CGLD25 Conserved in the Green Lineage and Diatoms 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGGGATCCAATGCAAGTGGGGGGATGACGACCTCACGCGCAGGGGAG
Internal bar code:TCTTGGTACGCAATAGCTCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:385
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGAACACGAGCCTTGTCTGA
Suggested primer 2:CACAAAACCGTGAACGACCC