Insertion junction: CLIP2.003409_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003409
Chromosome:chromosome 7
Location:5831466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTACCCAATCGCTGCCAGACACTACACGTATGCAACCCGGCGCAGAGGC
Internal bar code:ACCATTAATGGCATATAACAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1541
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TATGTTGACAAGGGTCCCGC
Suggested primer 2:TGGTCTAGGCGGGTTGGATA