Insertion junction: CLIP2.003411_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003411
Chromosome:chromosome 10
Location:6424073
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464650 CGL36 (1 of 1) PF12646 - Domain of unknown function (DUF3783) (DUF3783); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGTGTGGTGTGGGGGGTGCCACTGTCAATGAGCACATGCGGAGGGTC
Internal bar code:ACTATTCGCTATCATCATCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2514
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGTGTCGGCAATATCGC
Suggested primer 2:ATGGGCACGGGTTTACATGT