Insertion junction: CLIP2.003416_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003416
Chromosome:chromosome 13
Location:935362
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568050 SNRK2N (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase; snRK1 family in Chlamydomonas, subgroup 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTTTGCCACACAGGACGTGCTGTGCAGTGAGGGGCGTACTGAGGGCG
Internal bar code:GACGGCGGGGAGGTGCTGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2495
LEAP-Seq percent confirming:86.8421
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAAGCAACGTGTAGCAA
Suggested primer 2:ACTGGGTGTTTGCACAGTGA