Insertion junction: CLIP2.003417_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003417
Chromosome:chromosome 2
Location:7716694
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g146950 DBR1 RNA lariat debranching enzyme; (1 of 1) K18328 - lariat debranching enzyme [EC:3.1.-.-] (DBR1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCAAGCCCGTCCTGTCTTGCACACACCTCGCGACGCCGTGCCTCCAAA
Internal bar code:TATCCCGATACGAGCAACAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:750
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTCGTGTTGTGTTTGCG
Suggested primer 2:TGGACATTCACTCGTCGCAA