Insertion junction: CLIP2.003427_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003427
Chromosome:chromosome 12
Location:1882621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g512050 (1 of 57) 2.7.10.2 - Non-specific protein-tyrosine kinase / Cytoplasmic protein tyrosine kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCTATAACTCTGGCCTGGCGGGGACTCTCAAAGGAAATATTTTGCAA
Internal bar code:GACTTGTAGACATCTATGAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1456
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCGAATGACCTAGAGCG
Suggested primer 2:CGGCTAGCTGCGTATCTCAA