Insertion junction: CLIP2.003430_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003430
Chromosome:chromosome 5
Location:905831
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246551 (1 of 1) IPR000104//IPR001810//IPR020683 - Antifreeze protein, type I // F-box domain // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGCGCGGCGTGGAGCAGTTCATGGGGCAGCCGTCGCCGTCCGCAG
Internal bar code:TCCGGAGGGACGCTTCTCAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2161
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGACACACGACGAGAAGACG
Suggested primer 2:GCATTCTGGTTTCGCAGCAA