Insertion junction: CLIP2.003431_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003431
Chromosome:chromosome 12
Location:3139710
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500650 RNB2 (1 of 1) PTHR23355//PTHR23355:SF39 - RIBONUCLEASE // SUBFAMILY NOT NAMED; chloroplast RNase II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACATAGGCGTGTGCATGTGTGACTGCTACATATGCTTCGCCCCCGTT
Internal bar code:CAGGGTAGGCTGGTGGGGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2987
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGGTGCGTTGTTAGGAA
Suggested primer 2:GGTCGCATGGGATACAGGAG