Insertion junction: CLIP2.003445_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003445
Chromosome:chromosome 3
Location:7272159
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207400 (1 of 1) PTHR36846:SF1 - PROTEIN VIAA outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGTGTCGTCCTAACGGATGCGTGGGGACATGCCAACAAGTCCACACG
Internal bar code:CACTTTGCGCCAATCCCGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2252
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGCTTCCATGCCTTCA
Suggested primer 2:AATTCTGAGCAGGGCAGACC