Insertion junction: CLIP2.003454_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003454
Chromosome:chromosome 9
Location:4801141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402515 AMX1 (1 of 2) 1.4.3.21 - Primary-amine oxidase / Copper amine oxidase; Copper amine oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGTTTAGTTCGTACCCCCCCCCTGCTGCCCGCACCCATACCCAGGGGT
Internal bar code:TGCGATCGGCGGCCAGCTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:744
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGCTAACGTTGCAAGGA
Suggested primer 2:CTATAGACACCGCCGACACC