Insertion junction: CLIP2.003456_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003456
Chromosome:chromosome 13
Location:297041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g564050 (1 of 1) PTHR37764//PTHR37764:SF1 - FAMILY NOT NAMED // MOG1/PSBP/DUF1795-LIKE PHOTOSYSTEM II REACTION CENTER PSBP FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGAGGACCGGTTTGGGAGGAGCTCGCTCTGTCCAGCTGGCCGGAAGA
Internal bar code:GCTAGGTCTAACATTGATTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1539
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTCGCACAGTCAGATGCA
Suggested primer 2:CGCACATCATTGTAGGCAGC