Insertion junction: CLIP2.003460_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003460
Chromosome:chromosome 1
Location:4886005
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034050 (1 of 1) PTHR11751:SF428 - PROTEIN NKAT-1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGGGAAGTGTGCACCCTTGGGCACGCAGTCACGCAGCTTAAGACGAT
Internal bar code:TTTGATGTCAATAATACCTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2072
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAAGCTTCGCCTGTTTGC
Suggested primer 2:AGGGAAGGAGATACGCAGGT