Insertion junction: CLIP2.003464_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003464
Chromosome:chromosome 17
Location:3191915
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721200 3'UTR
Cre17.g721250 QilinDyf-3,FAP22,IFT38,Cluap1 (1 of 1) PF10234 - Clusterin-associated protein-1 (Cluap1); Intraflagellar Transport Protein 38 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATGTCTTTGCGGCCTCGTGAATACGGTACCTTGCGGCAGTGAGACTA
Internal bar code:CATGCTGCCCACTGAGCACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4118
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAACTGACGTCTGACCGG
Suggested primer 2:CCAGGATGACGACGAGGATG