Insertion junction: CLIP2.003464_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003464
Chromosome:chromosome 17
Location:3191924
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721200 3'UTR
Cre17.g721250 QilinDyf-3,FAP22,IFT38,Cluap1 (1 of 1) PF10234 - Clusterin-associated protein-1 (Cluap1); Intraflagellar Transport Protein 38 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTTGTGTCACGCTATGGCGGGTAGCCGTACATGGGGTAGCCACTCGC
Internal bar code:TAACTTCTGTCTTTAGCGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:803
LEAP-Seq percent confirming:11.3636
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGATGACGACGAGGATG
Suggested primer 2:TGAAACTGACGTCTGACCGG