Insertion junction: CLIP2.003474_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003474
Chromosome:chromosome 11
Location:3510635
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477625 CHLH2,MCH2 Magnesium chelatase subunit H; (1 of 1) PTHR23304//PTHR23304:SF109 - SPOT2-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCAACCAGCCGCACAATTTCATTCACATTGAAGAAACCAGAGATACGA
Internal bar code:ATTCGGACTCGTGGGTTTTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1154
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTGCATGCGTGTGTAGT
Suggested primer 2:CACACACCTTGTTGCAGCTC