Insertion junction: CLIP2.003479_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003479
Chromosome:chromosome 3
Location:2554041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159851 (1 of 2) IPR001623//IPR002110//IPR020683 - DnaJ domain // Ankyrin repeat // Ankyrin repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGCGATGTGACGCACTGCCGTTGACAGAGCCCGCAGCAGTGACATGC
Internal bar code:ACACACTAGGAGTAGGAGTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2956
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATACATCAGCAGCCTGC
Suggested primer 2:GCTTCTTATGCCTGCCATGC