Insertion junction: CLIP2.003480_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003480
Chromosome:chromosome 13
Location:2606076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580850 PRPL22 Chloroplast ribosomal protein L22/L18; (1 of 1) PTHR13501//PTHR13501:SF3 - CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCGTCACCGTGCCAGCCCCAAACTCACCGACCCTGAGCCCGCGGGCG
Internal bar code:GCCTTCAATAGGGACTCATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1964
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTTGCATGGGGGAAACG
Suggested primer 2:TATAAAACGGGCCGGGTCTG