Insertion junction: CLIP2.003488_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003488
Chromosome:chromosome 17
Location:3765917
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726650 CGL96 (1 of 1) K14839 - nucleolar protein 16 (NOP16); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCGTGCGCCCTCAGGCTCGACACACCACCGCGCACCTGTACCCATGT
Internal bar code:GGACAGATCTGGGCGTTGTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4322
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCAATTTGCTACCTACGC
Suggested primer 2:CGGCTATCAACCGCAAATGG