Insertion junction: CLIP2.003493_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003493
Chromosome:chromosome 2
Location:7568365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393173 ELI8,ELI2,ELIP8 Early light-induced LHC-like protein; (1 of 5) PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTGAGCTTCATACAACCTCCGCTTTCCCGCAACCGGTACACATTGCC
Internal bar code:TGAATCGCAGTCGTCCAGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3674
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTGGTTACGACGAGCGA
Suggested primer 2:CTGTCGATCACGCAGCATTG