Insertion junction: CLIP2.003502_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003502
Chromosome:chromosome 3
Location:9148466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200431 (1 of 1) IPR001356//IPR009057//IPR023214 - Homeobox domain // Homeodomain-like // HAD-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATGTGGGTGTGCGATGACAAGGACGATGAAGACGGACTGCGTGCACT
Internal bar code:AACTCTATTCCGTCGGGGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1539
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCATTGAAAGGGTTGC
Suggested primer 2:CCTACTCTGCTCTTCCCCCT