Insertion junction: CLIP2.003502_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003502
Chromosome:chromosome 3
Location:9148467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200431 (1 of 1) IPR001356//IPR009057//IPR023214 - Homeobox domain // Homeodomain-like // HAD-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGCTCCATGTCCTGTGCCGACCCTCCCCATCCCATAGGATGGCGAAA
Internal bar code:GAATCGGGGAGCTCTGCATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:76
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACTCTGCTCTTCCCCCT
Suggested primer 2:TGCTGCATTGAAAGGGTTGC