Insertion junction: CLIP2.003504_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003504
Chromosome:chromosome 16
Location:519346
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692650 CGL4 Conserved in the Green Lineage; (1 of 173) IPR029058 - Alpha/Beta hydrolase fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGCCTCATCCACCTCAGGGGCACAGCGCTGGAGGACAGCGGCATGG
Internal bar code:ACCGTGTTCTAGTTGCAAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:485
LEAP-Seq percent confirming:72.093
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTGTAGGAAGGGGAGAT
Suggested primer 2:CACCAGTTTGTCCTTGCAGC